IHECRE00003720.1 LIVE JSON
| Type | Single donor |
| Status | Partial |
| Project | Korea Epigenome Project (KNIH) |
| Description | Whole-Genome Bisulfite Sequencing(WGBS) paired end data, mRNA-Seq paired end data and miRNA-Seq single end data for Mesangial cells |
Metadata
| Biomaterial type | Primary Cell |
| Donor id | KEP20140012 |
| Disease ontology uri | http://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C4757&ns=NCI_Thesaurus |
| Donor life stage | adult |
| Passage if expanded | NA |
| Donor ethnicity | Korean |
| Donor sex | Male |
| Gender | male |
| Donor age unit | year |
| Taxon id | 9606 |
| Species | Homo sapiens |
| Sample ontology uri | http://purl.obolibrary.org/obo/UBERON_0002319 |
| Disease | Nephropathy |
| Donor age | 61-65 |
| Phenotype | CUI C0227651 |
| Markers | NA |
| Cell type | Mesangial |
| Biomaterial provider | Seoul National University Hospital |
| Donor health status | Cancer |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| miRNA-Seq | smRNA-Seq | EGA | EGAX00001530365 | EGAD00001003497 | https://ega-archive.org/datasets/EGAD00001003497 |
| RNA-Seq | mRNA-Seq | EGA | EGAX00001529780 | EGAD00001003481 | https://ega-archive.org/datasets/EGAD00001003481 |
| Bisulfite-Seq | DNA Methylation | EGA | EGAX00001529767 | EGAD00001003468 | https://ega-archive.org/datasets/EGAD00001003468 |