IHECRE00003686.3 LIVE JSON
| Type | Single donor |
| Status | Complete |
| Project | CEEHRC |
| Description | Primary Tissue from Diseased Thyroid from donor ID: SW-TTP-193 (age 44 years, Female, Diseased Thyroid sample with donor health condition: Thyroid Papillary Carcinoma) from Wiseman lab |
| Previous versions | IHECRE00003686.2 IHECRE00003686.1 |
Metadata
| Biomaterial type | Primary Tissue |
| Donor id | SW-TTP-193 |
| Disease ontology uri | https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0238463 |
| Donor life stage | adult |
| Donor ethnicity | Unknown |
| Donor sex | Female |
| Subject id | SW-TTP-193 |
| Gender | female |
| Donor age unit | year |
| Tissue type | Thyroid |
| Taxon id | 9606 |
| Species | Homo sapiens |
| Sample ontology uri | http://purl.obolibrary.org/obo/UBERON_0002046 |
| Disease | Thyroid Papillary Carcinoma |
| Donor age | 44 |
| Donor health status ontology uri | https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0238463 |
| Collection method | Gross Dissection |
| Phenotype | https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20MetaThesaurus&code=C0238463 , http://purl.obolibrary.org/obo/UBERON_0002046 |
| Sample id | CEMT0091 |
| Tissue depot | Thyroid |
| Donor health status | Thyroid Papillary Carcinoma |
| Biomaterial provider | Wiseman lab |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001500522 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| miRNA-Seq | smRNA-Seq | EGA | EGAX00001522899 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | ChIP-Seq Input | EGA | EGAX00001500526 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001500524 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K9me3 | EGA | EGAX00001500525 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001500523 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K27ac | EGA | EGAX00001523344 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001523343 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| Bisulfite-Seq | DNA Methylation | EGA | EGAX00001630599 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| WGS | WGS | EGA | EGAX00001588929 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| RNA-Seq | mRNA-Seq | EGA | EGAX00001567248 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |