IHECRE00001847.1 PREVIOUS JSON  


Type Single donor
Status Partial
Project ENCODE
Description Reference Epigenome for mouse midbrain (embryonic 13.5 day).
Live version IHECRE00001847.6

Metadata


Biomaterial type tissue
Donor id ENCDO956IXV
Health state healthy
Age 13.5 day
Link Protocol document; https://www.encodeproject.org/documents/a2b93f76-f042-4d86-b9c5-161973f1409c/@@download/attachment/Tissue_Excision_Protocol_022315.pdf
Tissue type midbrain
Taxon id 10090
Species Mus musculus
Sex pooled male and female
Description Midbrain from embryonic 13.5 day mice
Dev stage embryonic
Lab Len Pennacchio, LBNL

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
miRNA-Seq smRNA-Seq GEO GSM2192131 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192131
miRNA-Seq smRNA-Seq GEO GSM2192132 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192132
RNA-Seq mRNA-Seq GEO GSM2071570 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2071570
RNA-Seq mRNA-Seq GEO GSM2071571 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2071571
Bisulfite-Seq DNA Methylation GEO GSM2192495 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192495
Bisulfite-Seq DNA Methylation GEO GSM2192496 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192496
Bisulfite-Seq DNA Methylation GEO GSM2192497 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192497
Bisulfite-Seq DNA Methylation GEO GSM2192498 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192498