IHECRE00001820.1 PREVIOUS JSON  


Type Single donor
Status Partial
Project ENCODE
Description Reference epigenome for mouse hindbrain (embryonic 13.5 day).
Live version IHECRE00001820.6

Metadata


Biomaterial type tissue
Donor id ENCDO956IXV
Health state healthy
Age 13.5 day
Link Protocol document; https://www.encodeproject.org/documents/a2b93f76-f042-4d86-b9c5-161973f1409c/@@download/attachment/Tissue_Excision_Protocol_022315.pdf
Tissue type hindbrain
Taxon id 10090
Species Mus musculus
Sex pooled male and female
Description Hindbrain from embryonic 13.5 day mice
Dev stage embryonic
Lab Len Pennacchio, LBNL

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
RNA-Seq mRNA-Seq GEO GSM2071630 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2071630
RNA-Seq mRNA-Seq GEO GSM2071631 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2071631
Bisulfite-Seq DNA Methylation GEO GSM2192195 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192195
Bisulfite-Seq DNA Methylation GEO GSM2192196 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192196
Bisulfite-Seq DNA Methylation GEO GSM2192197 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192197
Bisulfite-Seq DNA Methylation GEO GSM2192198 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192198
miRNA-Seq smRNA-Seq GEO GSM2191284 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2191284
miRNA-Seq smRNA-Seq GEO GSM2191285 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2191285