IHECRE00000944.1 PREVIOUS JSON  


Type Single donor
Status Partial
Project NIH Roadmap Epigenomics
Description REMC Epigenome (Class 5) for Rectal Smooth Muscle using donors/samples:30
Live version IHECRE00000944.7

Metadata


Biomaterial type Primary Tissue
Donor id 30
Passage if expanded NA
Donor ethnicity white
Donor sex Female
Tissue type smooth muscle
Taxon id 9606
Species Homo sapiens
Disease none
Donor age 50
Collection method surgery
Tissue depot rectum
Donor health status normal smooth muscle
Biomaterial provider MGH Pathology

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq ChIP-Seq Input GEO GSM621657 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621657
ChIP-Seq Histone H3K9me3 GEO GSM621660 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621660
ChIP-Seq Histone H3K4me1 GEO GSM669964 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM669964
ChIP-Seq Histone H3K4me3 GEO GSM621662 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621662
Bisulfite-Seq DNA Methylation GEO GSM621730 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621730
ChIP-Seq Histone H3K27me3 GEO GSM621655 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621655
ChIP-Seq Histone H3K9ac GEO GSM621661 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621661
ChIP-Seq Histone H3K36me3 GEO GSM621656 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM621656
ChIP-Seq Histone H3K27ac GEO GSM1112796 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1112796