IHECRE00000936.2 PREVIOUS JSON  


Type Single donor
Status Complete
Project NIH Roadmap Epigenomics
Description REMC Epigenome (Class 2) for Right Atrium using donors/samples:STL003
Live version IHECRE00000936.7
Previous versions IHECRE00000936.1  

Metadata


Biomaterial type Primary Tissue
Donor id STL003
Donor ethnicity Caucasian
Donor sex Male
Tissue type Right Atrium
Taxon id 9606
Species Homo sapiens
Disease None
Donor age 34
Collection method Autopsy
Tissue depot N/A
Biomaterial provider Shin Lin, Stanford University
Donor health status polysubstance abuse (NO diabetes, hypertension, coronary artery disease, cancer)

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
Bisulfite-Seq DNA Methylation GEO GSM1120334 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1120334
Bisulfite-Seq DNA Methylation GEO GSM1120335 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1120335
Bisulfite-Seq DNA Methylation GEO GSM1010987 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1010987
RNA-Seq mRNA-Seq GEO GSM1010970 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1010970
ChIP-Seq ChIP-Seq Input GEO GSM906421 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM906421
ChIP-Seq Histone H3K4me3 GEO GSM1220296 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1220296
ChIP-Seq Histone H3K9me3 GEO GSM910587 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM910587
ChIP-Seq Histone H3K27me3 GEO GSM1220286 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1220286
ChIP-Seq Histone H3K4me1 GEO GSM915335 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM915335
ChIP-Seq Histone H3K27ac GEO GSM910557 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM910557
ChIP-Seq Histone H3K36me3 GEO GSM1013144 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1013144
ChIP-Seq Histone H3K36me3 GEO GSM1282364 None http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1282364