IHECRE00000231.3 LIVE JSON
| Type | Pooled samples |
| Status | Complete |
| Project | CEEHRC |
| Description | Primary Cell from Normal Mammary gland-Breast from donor ID: CEMT_35-38_pool (pooled sample from multiple donors) (age Mixed, Female, cell type:Luminal cells-mature, Mammary gland-Breast with disease_status: NA) from Aparicio/Eaves Lab |
| Previous versions | IHECRE00000231.2 IHECRE00000231.1 |
Metadata
| Biomaterial type | Primary Cell |
| Disease ontology uri | https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20Metathesaurus&code=C0549184 |
| Donor id | CEMT_35-38_pool |
| Origin sample ontology uri | http://purl.obolibrary.org/obo/UBERON_0000310 |
| Donor life stage | adult |
| Passage if expanded | NA |
| Donor ethnicity | NA |
| Pool id | CEMT_35-38_pool |
| Donor sex | Female |
| Origin sample | Breast |
| Gender | female |
| Donor age unit | year |
| Taxon id | 9606 |
| Species | Homo sapiens |
| Sample ontology uri | http://purl.obolibrary.org/obo/UBERON_0000310 Ontobee : UBERON_0000310 |
| Disease | None |
| Donor age | NA |
| Donor health status ontology uri | https://ncimeta.nci.nih.gov/ncimbrowser/ConceptReport.jsp?dictionary=NCI%20Metathesaurus&code=C0277545 |
| Ihec reference epigenome identifier | CEMT0037 |
| Sample id | CEMT0037 |
| Cell type | Luminal cells-mature |
| Markers | DAPI-CD45-CD31-CD49f-EpCAM+ |
| Biomaterial provider | Aparicio/Eaves Lab |
| Donor health status | Unknown |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| Bisulfite-Seq | DNA Methylation | EGA | EGAX00001272556 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K4me1 | EGA | EGAX00001207328 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K4me3 | EGA | EGAX00001207329 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K9me3 | EGA | EGAX00001207330 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K27me3 | EGA | EGAX00001207331 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K36me3 | EGA | EGAX00001207332 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | Histone H3K27ac | EGA | EGAX00001207333 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| ChIP-Seq | ChIP-Seq Input | EGA | EGAX00001207334 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| RNA-Seq | mRNA-Seq | EGA | EGAX00001248564 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |
| miRNA-Seq | smRNA-Seq | EGA | EGAX00001248527 | EGAD00001003963 | https://ega-archive.org/datasets/EGAD00001003963 |