Training

EMBL-EBI Training

We train scientists at all levels to get the most out of publicly available biological data.

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Training events

February 2019

5
Introduction to Metabolomics Analysis
European Bioinformatics Institute (EMBL-EBI) - Wellcome Genome Campus, Hinxton, Cambridge,  CB10 1SD, United Kingdom
5th 8th Feb

This course will provide an introduction to metabolomics data analysis using publically available software and tools.

Open application with selection

Online courses

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ChEBI: Quick tour

Author(s): Gareth Owen

This quick tour provides a brief introduction to ChEBI, the EBI's Chemical Entities of Biological Interest database, which focuses on 'small' chemical compounds. For a more detailed walthrough of ChEBI, have a look at our ChEBI: the online...

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ChEBI: The online chemical dictionary for small molecules

Author(s): Namrata Kale

Chemical Entities of Biological Interest (ChEBI) is a user-friendly online chemical dictionary that focuses on the nomenclature, structure, and biological properties of 'small' molecules that may be encountered by anyone working in (or merely with...

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ChEMBL walkthrough: webinar

Author(s): Prudence Mutowo

Prudence Mutowo presents this webinar on ChEMBL - a manually curated chemical database of bioactive molecules with drug-like properties. This webinar took place on 6th February 2017 and is an update to a webinar recorded by Louisa Bellis in 2015. It...

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ChEMBL: Exploring bioactive drug-like molecules

Author(s): Louisa Bellis

This course will show you the content and search facilities for the ChEMBL database . ChEMBL is a database of bioactive drug-like molecules, and contains 2D structures, calculated properties and associated bioactivities. Some basic understanding of...

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ChEMBL: Quick tour

Author(s): Louisa Bellis

This quick tour provides a brief introduction to ChEMBL, the EBI's chemogenomics resource. For a more detailed walthrough of ChEMBL, have a look at our ChEMBL: Exploring bioactive drug-like molecules tutorial.

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Computational chemistry in drug discovery

Darren Green, Director of Computational Chemistry at GSK, presents a talk on using computational chemistry approaches for drug discovery. The talk explains how informatics can aid many steps in the discovery and development process, to elucidate...

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diXa data warehouse: Exploring data from toxicogenomics studies

Author(s): Vera Matser

The diXa data warehouse is a curated collection of toxicogenomics experiments, accessible through the diXa website . This course will show you how to use the diXa warehouse and what data is available.

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Drug repurposing

Author(s): John Overington

John Overington, Director of Bioinformatics at Stratified Medical, and former group leader at EMBL-EBI, presents a talk on the repurposing of drugs for novel therapeutic applications. The talk explores how computational approaches can be used to...

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Druggability and the druggable genome

Author(s): Anna Gaulton

Anna Gaulton presents this webinar on the druggable genome and the concept of druggability. She discusses why druggability is so important in drug discovery and what methods and databases you can used to determine the druggability of your targets...

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Enzyme Portal: Quick tour

Author(s): Sangya Pundir

This quick tour provides a brief introduction to the Enzyme Portal - a data resource that provides access to information from several enzyme-related databases, both at EMBL-EBI and the Swiss Institute of Bioinformatics (SIB).

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MetaboLights: Quick tour

Author(s): Kenneth Haug

This quick tour provides a brief introduction to the EBI's metabolomics resource: MetaboLights .

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Metabolomics: An introduction

Author(s): Reza Salek, Laura Emery, Stephan Beisken

This course provides a basic introduction into the rapidly emerging field of metabolomics and its importance and applications.

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Metabolomics: molecules of life, an introduction

Author(s): Reza Salek

Join Reza Salek on an introductory tour of metabolomics. This webinar will help you understand what metabolomics is and how it can be used to inform biological research. It will also introduce the basics of the analytical technologies and data...

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myChEMBL: webinar

Author(s): George Papadatos

George Papadatos takes you through myChEMBL - the ChEMBL virtual machine. This video is best viewed in full screen, using Google Chrome. See upcoming webinars from this series.

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PDBe: Exploring a Protein Data Bank (PDB) entry

Author(s): Sanchayita Sen

This course will show you how to explore the structural information in a PDB entry using the Protein Data Bank in Europe (PDBe) - EMBL-EBI's resource for the collection, organisation and dissemination of data on biological macromolecular structures...

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PDBe: Searching for biological macromolecular structures

Author(s): David Armstrong

The Protein Data Bank in Europe (PDBe) is a free and easily accessible resource for biological macromolecular structures. We collect, organise and disseminate data in both the Protein Data Bank (PDB) and the Electron Microscopy Data Bank (EMDB)...

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PDBe: Searching the Protein Data Bank

Author(s): Sanchayita Sen

This course will show you how to search the Protein Data Bank in Europe (PDBe) - EMBL-EBI's resource for the collection, organisation and dissemination of data on biological macromolecular structures. The course contains the following mini-tutorials...

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PDBeChem: Searching for small molecules and small molecule fragments

Author(s): Gary Battle

PDBeChem allows you to search for chemical components (ligands, small molecules and monomers) that appear in PDB entries, and discover which protein structures bind a particular ligand. This course will show you how to use PDBeChem and what you can...

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PhenoMeNal: accessing metabolomics workflows in Galaxy

Author(s): Namrata Kale, Sijin He, Pablo Moreno

PhenoMeNal ( Phe nome and Me tabolome a Nal ysis) is a standardised e-infrastructure that supports the data processing and analysis pipelines for molecular phenotype data generated by metabolomics applications. This course will give you an overview...

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SureChEMBL: Accessing chemical patent data: webinar

This two-part webinar from George Papadatos provides you with an introduction to the chemical patent database SureChEMBL (recorded on 11th March 2015). Part 1 gives an overview of what SureChEMBL is and why it is important. Part 2 provides a demo of...

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UniChem: EMBL-EBI’s mapping tool for small molecule database identifiers: webinar

Author(s): Jon Chambers, Anne Hersey

Jon Chambers and Anne Hersey present this webinar on UniChem a simple system developed to cross-reference compounds across databases both internal to EMBL-EBI and externally. UniChem currently has cross-references to 140 million compounds in 30...

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UniChem: Quick tour

Author(s): Jon Chambers

This quick tour provides a brief introduction to UniChem , a compound identifier mapping service. It covers the scientific principles behind the tool, and outlines the use of UniChem and UniChem 'Connectivity Search' to directly locate identical and...

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