{"id":459,"date":"2022-10-24T13:38:53","date_gmt":"2022-10-24T13:38:53","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/nextflow\/"},"modified":"2024-02-12T14:56:19","modified_gmt":"2024-02-12T14:56:19","slug":"nextflow","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/why-create-workflows\/nextflow\/","title":{"rendered":"NextFlow"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\">NextFlow is a <a rel=\"noreferrer noopener\" href=\"https:\/\/nextflow.io\/\" target=\"_blank\">free open source software <\/a>distributed under the Apache 2.0 licence developed by&nbsp;<a rel=\"noreferrer noopener\" href=\"http:\/\/www.seqera.io\/\" target=\"_blank\">Seqera Labs.<\/a>&nbsp;NextFlow is used by scientists to write, deploy and share data-intensive workflows.<sup><a href=\"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/references\/\">2<\/a><\/sup><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">NextFlow:<sup><a href=\"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/references\/\">2<\/a><\/sup><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>is scalable; it can be run on a laptop or cloud without making changes<\/li>\n\n\n\n<li>can be integrated with GitHub so workflows can be executed directly from GitHub<\/li>\n\n\n\n<li>supports Docker and Singularity<\/li>\n\n\n\n<li>has example workflows <\/li>\n\n\n\n<li>provides a quick start guide<\/li>\n\n\n\n<li>has a community of users in a Slack workspace <\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\">Discover what a basic workflow looks like in NextFlow with <a rel=\"noreferrer noopener\" href=\"https:\/\/nextflow.io\/example1.html\" target=\"_blank\">this example<\/a> and follow the <a rel=\"noreferrer noopener\" href=\"https:\/\/nextflow.io\/index.html#GetStarted\" target=\"_blank\">quick steps to get started.<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">To learn more, there is <a href=\"https:\/\/training.nextflow.io\/\" target=\"_blank\" rel=\"noreferrer noopener\">training available from NextFlow<\/a>. <\/p>\n","protected":false},"excerpt":{"rendered":"<p>NextFlow is a free open source software distributed under the Apache 2.0 licence developed by&nbsp;Seqera Labs.&nbsp;NextFlow is used by scientists to write, deploy and share data-intensive workflows.2 NextFlow:2 Discover what a basic workflow looks like in NextFlow with this example and follow the quick steps to get started. To learn more, there is training available&#8230;<\/p>\n","protected":false},"author":30,"featured_media":0,"parent":8,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-459","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/pages\/459","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/users\/30"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/comments?post=459"}],"version-history":[{"count":10,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/pages\/459\/revisions"}],"predecessor-version":[{"id":697,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/pages\/459\/revisions\/697"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/pages\/8"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/workflows-combining-tools-for-data-analysis\/wp-json\/wp\/v2\/media?parent=459"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}