{"id":100,"date":"2020-04-28T10:55:24","date_gmt":"2020-04-28T10:55:24","guid":{"rendered":"http:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/submitting-data-to-resource-name\/"},"modified":"2020-10-28T09:15:37","modified_gmt":"2020-10-28T09:15:37","slug":"content-and-cross-references","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/what-is-reactome\/content-and-cross-references\/","title":{"rendered":"Content and cross-references"},"content":{"rendered":"\n

Content<\/h3>\n\n\n\n

Since its creation in 2002, Reactome has been consistently improving its coverage by accumulating data on human reactions and pathways. With a quarterly release cycle, new information flows into Reactome every four months. Some useful metrics of Reactome content are shown in figure 6.<\/p>\n\n\n\n

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Figure 6<\/strong> Reactome content.<\/figcaption><\/figure><\/div>\n\n\n\n

Cross-references<\/h3>\n\n\n\n

Reactome uses UniProt accession numbers<\/a> as the primary external reference identifier for peptides. Other primary external references are: ChEBI<\/a> for small molecules, NCBI taxonomy IDs<\/a> for species, Gene Ontology<\/a> (GO) terms for catalytic molecular functions, cellular compartments and biological processes. Reactome cross-references many other relevant sources of biological, chemical and literature information. Reactome’s primary external reference databases are shown in Figure 7.<\/p>\n\n\n\n

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Figure 7<\/strong> Primary database resources cross-referenced by Reactome.<\/figcaption><\/figure><\/div>\n","protected":false},"excerpt":{"rendered":"

Content Since its creation in 2002, Reactome has been consistently improving its coverage by accumulating data on human reactions and pathways. With a quarterly release cycle, new information flows into Reactome every four months. Some useful metrics of Reactome content are shown in figure 6. Cross-references Reactome uses UniProt accession numbers as the primary external…<\/p>\n","protected":false},"author":30,"featured_media":0,"parent":70,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-100","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/pages\/100","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/users\/30"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/comments?post=100"}],"version-history":[{"count":3,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/pages\/100\/revisions"}],"predecessor-version":[{"id":402,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/pages\/100\/revisions\/402"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/pages\/70"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/reactome-exploring-biological-pathways\/wp-json\/wp\/v2\/media?parent=100"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}