- Course overview
- Search within this course
- What is PDBeFold?
- PDBeFold for structural comparison in the Leukotoxin family
- Starting up PDBeFold from the PDBe homepage
- Search results for PDB entry 1pvl
- Displaying the results
- Comparing the matches with your query
- Summary
- Your feedback
- Learn more
- Get help and support on PDBeFold
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Summary
- PDBeFold is an interactive service that allows you to identify structures that are similar to that of your reference protein
- You can perform pairwise or multiple comparisons as well as 3D alignments of structures
- Results are ordered by the PDBeFold program’s estimate of the quality of each match, known as the Q-score
- The most interesting results are generally displayed at the bottom of the table as they have the most structural similarity with your reference protein