- Course overview
- Search within this course
- Introduction
- Course materials and software
- Metagenomics bioinformatics – course introduction
- Quality control and host decontamination
- The European Nucleotide Archive
- Tools to assemble short reads
- MGnify services
- MGnifyR
- Binning and MAG generation
- ENA metagenomics standards
- MGnify MAG resources
- Strain resolution
- Tools for comparative metagenomics
- Your feedback
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The European Nucleotide Archive
Sam Holt, a curator from ENA, introduces the European Nucleotide Archive – a repository for nucleotide sequencing data – and the role the data resource plays in the metagenomics analysis pipeline.
This presentation covers what the ENA repository is, and why it is good practice to submit your data to public repositories. Sam describes the data and metadata models within ENA and how you can go about submitting your own data.
Further training on ENA
You can find more out about ENA in this online tutorial:
The ENA also provide an extensive collection of guides and tutorials for submitting to, and retrieving from the archive: