- Course overview
- Search within this course
- What is InterPro?
- InterPro data
- Searching InterPro
- Visualising InterPro data
- Getting data from InterPro
- Your feedback
- Get help and support on InterPro
- References
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Searching InterPro
You can search InterPro using:
- Sequence search, which uses the InterProScan analysis tool to predict the family and domain information for an amino acid sequence;
- Text search, using InterPro entry names, short names and identifiers, member database signature short names and identifiers, UniProt identifiers and short names, gene names, GO terms, PDB, proteome, taxonomy and set identifiers, or free text, to find information in InterPro relating to your query;
- Search for a domain architecture, for entries related to a Pfam model;
- Browse through InterPro entries, member databases, proteins, structures, taxonomy, proteomes or clan/sets.
Figure 2 highlights the location of the different search entry points on the InterPro web interface.
Below is a demo video on how to perform different types of search in the InterPro website.