{"id":196,"date":"2020-05-21T09:43:00","date_gmt":"2020-05-21T09:43:00","guid":{"rendered":"http:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/exercises\/"},"modified":"2023-04-05T10:23:12","modified_gmt":"2023-04-05T10:23:12","slug":"exercise","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/exercise\/","title":{"rendered":"Exercise: analyse a protein sequence"},"content":{"rendered":"\n<h2 class=\"wp-block-heading\"><strong>Scenario<\/strong><\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">You have isolated a protein from squirrel. You want to know more about this protein, perhaps the presence of certain domains or features can give you a clue about its role.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>Exercise<\/strong><\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">Find information about the following protein using&nbsp;InterPro:<\/p>\n\n\n\n<pre class=\"wp-block-preformatted\">&gt;squirrel_seq<br>MALPARLVPLCCLALLALPAQSCGPGRGPVGRRRYVRKQLVPLLYKQ<br>FVPSVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSG<br>ADRLMTERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSLH<br>YEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHVHVSVKA<br>GTVGGGCFRETEAAQLWGDARGLRELHRAWVLAADAAGRVVPTPVLL<br>FLDRDLQRRASFVAVETERPPRKLLLTPWHLVFAARGPAPAPGDFAP<br>VFARRLRAGDSVLAPGGDALRPARVARVAREEAVGVFAPLTAHGTLL<br>VNDVLASCYAVLESHQWAHRAFAPLRLLHALGALLPGGAVQPTGMHW<br>YSRFLYRLAEELLG<\/pre>\n\n\n\n<h2 class=\"wp-block-heading\">Need some help?<\/h2>\n\n\n<div class=\"h5p-iframe-wrapper\"><iframe id=\"h5p-iframe-17\" class=\"h5p-iframe\" data-content-id=\"17\" style=\"height:1px\" src=\"about:blank\" frameBorder=\"0\" scrolling=\"no\" title=\"search help\"><\/iframe><\/div>\n","protected":false},"excerpt":{"rendered":"<p>Scenario You have isolated a protein from squirrel. You want to know more about this protein, perhaps the presence of certain domains or features can give you a clue about its role. Exercise Find information about the following protein using&nbsp;InterPro: &gt;squirrel_seqMALPARLVPLCCLALLALPAQSCGPGRGPVGRRRYVRKQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSGADRLMTERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHVHVSVKAGTVGGGCFRETEAAQLWGDARGLRELHRAWVLAADAAGRVVPTPVLLFLDRDLQRRASFVAVETERPPRKLLLTPWHLVFAARGPAPAPGDFAPVFARRLRAGDSVLAPGGDALRPARVARVAREEAVGVFAPLTAHGTLLVNDVLASCYAVLESHQWAHRAFAPLRLLHALGALLPGGAVQPTGMHWYSRFLYRLAEELLG Need some help?<\/p>\n","protected":false},"author":30,"featured_media":0,"parent":0,"menu_order":5,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-196","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/196","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/users\/30"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/comments?post=196"}],"version-history":[{"count":4,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/196\/revisions"}],"predecessor-version":[{"id":1373,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/196\/revisions\/1373"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/media?parent=196"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}