{"id":152,"date":"2020-05-21T09:33:06","date_gmt":"2020-05-21T09:33:06","guid":{"rendered":"http:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/why-do-we-need-interpro\/"},"modified":"2025-04-29T12:52:57","modified_gmt":"2025-04-29T12:52:57","slug":"why-do-we-need-interpro","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/what-is-interpro\/why-do-we-need-interpro\/","title":{"rendered":"Why do we need InterPro?"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\">Protein signature&nbsp;databases have become vital tools for classification of protein sequences in order to infer their function. Many protein signature-based resources are now available, each with their own strengths and weaknesses.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">We need&nbsp;InterPro&nbsp;because it:<\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>reduces redundancy and simplifies protein sequence analysis by integrating signatures from different member databases that represent the same&nbsp;protein family,&nbsp;domain&nbsp;or site.<\/li>\n<\/ul>\n\n\n\n<ul class=\"wp-block-list\">\n<li>unites the member databases, capitalising on their individual strengths to produce a powerful classification tool.<\/li>\n<\/ul>\n\n\n\n<ul class=\"wp-block-list\">\n<li>provides a single convenient searchable location, allowing simultaneous querying of all member databases.<\/li>\n<\/ul>\n\n\n\n<ul class=\"wp-block-list\">\n<li>adds information (including descriptive abstracts and&nbsp;Gene Ontology&nbsp;terms) to the signatures, which may be used to annotate the proteins they match.<\/li>\n<\/ul>\n\n\n\n<ul class=\"wp-block-list\">\n<li>contains experimental and predicted structures for UniprotKB proteins, allowing to visualise protein annotations in the context of protein 3D structures.<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Protein signature&nbsp;databases have become vital tools for classification of protein sequences in order to infer their function. Many protein signature-based resources are now available, each with their own strengths and weaknesses. We need&nbsp;InterPro&nbsp;because it:<\/p>\n","protected":false},"author":30,"featured_media":0,"parent":130,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-152","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/152","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/users\/30"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/comments?post=152"}],"version-history":[{"count":3,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/152\/revisions"}],"predecessor-version":[{"id":2073,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/152\/revisions\/2073"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/pages\/130"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-functional-and-structural-analysis\/wp-json\/wp\/v2\/media?parent=152"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}