{"id":98,"date":"2020-04-28T10:55:24","date_gmt":"2020-04-28T10:55:24","guid":{"rendered":"http:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/getting-data-from-resource-name\/"},"modified":"2023-04-05T12:45:46","modified_gmt":"2023-04-05T12:45:46","slug":"case-study-3-panther","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/case-study-3-panther\/","title":{"rendered":"Case study 3: PANTHER"},"content":{"rendered":"\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-8f761849 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-vertically-aligned-center is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"wp-block-paragraph\">The <a href=\"http:\/\/www.pantherdb.org\/\">PANTHER<\/a> (Protein ANalysis THrough Evolutionary Relationships) Classification System was designed to classify proteins (and their genes) in order to facilitate high-throughput analysis. The PANTHER Classifications are the result of human curation as well as sophisticated bioinformatics algorithms.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">This third case study focuses on the protein signatures developed by the PANTHER resource, and how trees are used within PANTHER.<\/p>\n<\/div>\n<\/div>\n\n\n\n<div style=\"text-align:center\"><iframe loading=\"lazy\" src=\"https:\/\/embl-ebi.cloud.panopto.eu\/Panopto\/Pages\/Embed.aspx?id=56eabbb0-94b2-493e-a409-ad36009fc312&amp;autoplay=false&amp;offerviewer=true&amp;showtitle=true&amp;showbrand=false&amp;start=0&amp;interactivity=all\" style=\"border: 1px solid #464646;\" allowfullscreen=\"\" allow=\"autoplay\" width=\"720\" height=\"405\"><\/iframe><\/div>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">For more information about the PANTHER resource including usage instructions, a user manual, and links to a tutorial presentation, see the\u00a0<a rel=\"noreferrer noopener\" href=\"http:\/\/www.pantherdb.org\/help\/PANTHERhelp.jsp\" target=\"_blank\">help pages of the PANTHER website.<\/a>\u00a0<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System was designed to classify proteins (and their genes) in order to facilitate high-throughput analysis. The PANTHER Classifications are the result of human curation as well as sophisticated bioinformatics algorithms. This third case study focuses on the protein signatures developed by the PANTHER resource, and how trees&#8230;<\/p>\n","protected":false},"author":30,"featured_media":0,"parent":0,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-98","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages\/98","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/users\/30"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/comments?post=98"}],"version-history":[{"count":8,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages\/98\/revisions"}],"predecessor-version":[{"id":407,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages\/98\/revisions\/407"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/media?parent=98"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}