{"id":70,"date":"2020-04-28T10:57:24","date_gmt":"2020-04-28T10:57:10","guid":{"rendered":"http:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/?page_id=70"},"modified":"2023-04-05T12:45:10","modified_gmt":"2023-04-05T12:45:10","slug":"case-study-1-sfld","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/case-study-1-sfld\/","title":{"rendered":"Case study 1: SFLD"},"content":{"rendered":"\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-8f761849 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-vertically-aligned-center is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"wp-block-paragraph\">The Structure-Function Linkage Database (<a href=\"http:\/\/sfld.rbvi.ucsf.edu\/archive\/django\/index.html\">SFLD<\/a>) is a hierarchical classification of enzymes that relates specific sequence-structure features to specific chemical capabilities.<\/p>\n\n\n\n<p class=\"wp-block-paragraph\">This first case study describes how the protein signatures generated by the SFLD are arranged in relation to each other, and what can be inferred from their position within the hierarchy.<\/p>\n\n\n\n<div style=\"text-align:center\"><iframe loading=\"lazy\" src=\"https:\/\/embl-ebi.cloud.panopto.eu\/Panopto\/Pages\/Embed.aspx?id=02938c41-255c-4d43-bd79-ad36009fc2bc&amp;autoplay=false&amp;offerviewer=true&amp;showtitle=true&amp;showbrand=false&amp;start=0&amp;interactivity=all\" style=\"border: 1px solid #464646;\" allowfullscreen=\"\" allow=\"autoplay\" width=\"720\" height=\"405\"><\/iframe><\/div>\n<\/div>\n<\/div>\n\n\n\n<p class=\"wp-block-paragraph\">For further information, and support in using SFLD, see the\u00a0<a rel=\"noreferrer noopener\" href=\"http:\/\/sfld.rbvi.ucsf.edu\/archive\/django\/index.html\" target=\"_blank\">documentation pages on the SFLD website<\/a>. There are also a number of\u00a0<a rel=\"noreferrer noopener\" href=\"http:\/\/sfld.rbvi.ucsf.edu\/archive\/django\/web\/tutorial_links\/index.html\" target=\"_blank\">online tutorials<\/a>\u00a0available, as well as a\u00a0<a href=\"babbitt@cgl.ucsf.edu\">helpdesk email address<\/a>. <\/p>\n","protected":false},"excerpt":{"rendered":"<p>The Structure-Function Linkage Database (SFLD) is a hierarchical classification of enzymes that relates specific sequence-structure features to specific chemical capabilities. This first case study describes how the protein signatures generated by the SFLD are arranged in relation to each other, and what can be inferred from their position within the hierarchy. For further information, and&#8230;<\/p>\n","protected":false},"author":30,"featured_media":0,"parent":0,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-70","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages\/70","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/users\/30"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/comments?post=70"}],"version-history":[{"count":13,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages\/70\/revisions"}],"predecessor-version":[{"id":403,"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/pages\/70\/revisions\/403"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/online\/courses\/interpro-a-case-study\/wp-json\/wp\/v2\/media?parent=70"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}