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- What is functional genomics?
- Functional genomic resources at EMBL-EBI
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- References
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Recommended online courses
- Functional genomics (I): Introduction and designing experiments
- Functional genomics (II): Common technologies and data analysis methods
- Functional genomics (III): Submitting your data and functional genomics databases
- ArrayExpress in BioStudies: Quick tour
- Expression Atlas: Quick tour
- Life cell by cell: Introduction to Single Cell Expression Atlas
- Accessing single cell transcriptome data with the Human Cell Atlas Data Portal
Find out more
- ArrayExpress help, Expression Atlas help and SCEA help provide an up-to-date guide on making the most out of the three databases
- Ensembl is a genome databases for vertebrates and other eukaryotic species
- Uniprot is a resource for protein sequence and functional information.
- GEO is a public functional genomics data repository at the NCBI.
- Interpro is a database used for the classification and automatic annotation of proteins and genomes.
- Gene Ontology is a project which provides an ontology of defined terms representing gene product properties.
- Europe PubMed Central (PMC) is a literature resource providing access to all PubMed abstracts, Europe PMC full text articles, patent abstracts and many more.
Books
- Functional genomics: methods and protocols by Michael J. Brownstein, Arkady B. Khodursky. Humana Press.
- Computational text analysis for functional genomics and bioinformatics by Soumya Raychaudhuri. Oxford University Press.
- Bioinformatics and functional genomics by Jonathan Pevsner. Wiley-Blackwell.