Getting data from Expression Atlas

Downloading baseline and differential expression results

You can download baseline expression results by clicking on the Download button above the heatmap (Figure 17A) and differential expression results by clicking on the Download results button above the results table (Figure 17B).

Figure 17 Download baseline and differential expression results.

Downloading results from an experiment page

Use the Downloads tab on the baseline experiment page (Figure 18A) to download: 

  • Gene expression results in tab-delimited format
  • A file containing the R object representing the experiment
  • The results of hierarchical clustering using the top 100 most variable genes across all tissues (or other condition) in the experiment

Use the Downloads tab on the differential experiment page (Figure 18B) to download:

  • RNA-seq raw counts or normalised microarray intensity data
  • All statistical analysis results for all comparisons in the experiment
  • A file containing the R object representing the experiment
Figure 18 Download results from baseline and differential experiment page.