Download data from Ensembl using BioMart

Our Biomart tool allows you to extract data from our databases. Select your data type (genes, variation or regulation) and species. Open ‘Filters’ to filter your data. Open ‘Attributes’ to select the output you want to recover. Click ‘Results’.

Figure 11 The BioMart tool enables you to extract data from our databases.

We also have a BioMart video tutorial that will guide you through exporting Ensembl data with BioMart, available from YouTube.