- Course overview
- Search within this course
- How to take this course
- Installing the Perl API
- Core
- Variation
- Compara trees
- Compara alignments
- Your feedback
- Get help and support on the Ensembl Perl API
- References
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References
- Harrison P.W., et al. (2024) Ensembl 2024. Nucleic Acids Res. 52(D1):D891-D899.
- Martin F.J., et al. (2023) Ensembl 2023. Nucleic Acids Res. 51(D1):D933-D941.
- Cunningham F., et al. (2022) Ensembl 2022. Nucleic Acids Res. 50(D1):D988-D995.
- Yates A., et al. (2022) Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. Nucleic Acids Res. 50(D1):D996-D1003.
- Howe K.L., et al. (2021) Ensembl 2021. Nucleic Acids Res. 49(D1):D884-D891.
- Yates A., et al. (2020) Ensembl 2020. Nucleic Acids Res. 48(D1) D682-D688.
- Howe KL., et al. (2019) Ensembl Genomes 2020-enabling non-vertebrate genomic research. Nucleic Acids Res. 48(D1) D689-D695.
- McLaren W., et al. (2010). Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor. Bioinformatics. 26(16) 2069-2070.
- Vilella AJ., et al. (2009). EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates. Genome Res. 19(2) 327-335.
- Zerbino DR., et al. (2015) The Ensembl regulatory build. Genome Biol. 16(1) 56.
- Zerbino DR., et al. (2016) Ensembl regulation resources. Database (Oxford). pii:bav119.
- Herrero J., et al. (2016) Ensembl comparative genomics resources. Database (Oxford). pii:bav096.
- McLaren W., et al. (2016) The Ensembl Variant Effect Predictor. Genome Biol. 17(1) 122.
- Ruffier M., et al. (2017) Ensembl core software resources: storage and programmatic access for DNA sequence and genome annotation. Database (Oxford). bax020
- Hunt SE., et al. (2018) Ensembl variation resources. Database (Oxford). bay119.