ProteomeXchange submissions via PRIDE


This course covers how to submit MS/MS data to ProteomeXchange via PRIDE. This course is aimed at people in the proteomics community (staff scientiststs, students, researchers, PIs, bioinformaticians) with data that they want to make available through public-domain databases of proteomics experiments.

An undergraduate degree in life sciences, and some background knowledge in mass spectrometry, would be an advantage.

Course updated in January 2018.

About this course

Learning objectives: 
  • Have a basic knowledge of the resources PRIDE and PeptideAtlas (including the PASSEL component)
  • Be able to submit mass spectrometry data to the ProteomeXchange consortium via PRIDE
  • Be able to confidently use the ProteomeXchange submission tool
  • Be aware of the complete and partial submission pipelines