PhenoMeNal: accessing metabolomics workflows in Galaxy

PhenoMeNal (Phenome and Metabolome aNalysis) is a standardised e-infrastructure that supports the data processing and analysis pipelines for molecular phenotype data generated by metabolomics applications. This course will give you an overview of PhenoMeNal, how to create your cloud research environment, and how to access Galaxy workflows for metabolomics data.

This course is aimed at metabolomics researchers and bioinformaticians. An undergraduate-level understanding of biology and metabolomics would be an advantage. You do not need to be a bioinformatician to use PhenoMeNal, but an understanding of the tools and steps used to analyse metabolomics data would be useful.  

We recommend that you first complete our course Metabolomics: An introduction.

You might also be interested in our course MetaboLights: Quick tour.

PhenoMeNal uses Galaxy to create metabolomics workflows. To familiarise yourself with Galaxy we recommend these guided tours from the Galaxy team.

About this course

Learning objectives: 
  • Describe what PhenoMeNal is and when to use it
  • Create your cloud research environment
  • Access Galaxy workflows via PhenoMeNal