Find all phenotypes associated with the human SNP named rs12913832 and give:
- Phenotype description, source and p‐value
- Find frequencies in 1000 Genomes populations for the (risk) allele assosicated with phenotype ‘Eye color’ [sic].
Hint: You might find the perl split function useful: my ($name, $allele) = split(‘‐’, ‘rs9894429‐T’);
1000 genomes populations start with: ‘1000GENOMES’
Anja explains the answers to these questions in this 2 min video. You can also download her sample script and expected output.