Get whole genomes with FTP

Download the genome sequence for an organism, all the cDNA, genes, proteins, or ncRNAs for a species, and more with the ftp site (Figure 45). You can get the whole mouse genome sequence, all the proteins in the human genome, or the genes for zebrafish, for example.

Figure 45. The ftp site allows sequence download for Ensembl species.

You can also download GenBank files, gene sets in GTF formats, or the MySQL tables themselves.