Submitting pre-publication data
As mentioned earlier, you can keep the pre-publication data you have submitted to ENA confidential for up to two years in the first instance. If you want EBI Metagenomics to analyse data held confidentially, you have to provide an explicit agreement that EBI Metagenomics can access the data, in line with ENA's data access policies. You can provide this agreement while registering on the EBI Metagenomics portal. If you are already a registered ENA user, you can provide your agreement while submitting your data via the EBI Metagenomics portal.
The EBI Megtagenomics analysis results for confidential data are held in the private section of the website - you will need to log in (using the same credentials as on the ENA website) to access them.