This course provides an introduction to the theory and concepts of network analysis. It explores some of the features of protein-protein interaction networks and their implications for biology. Finally, the course discusses the tools and...

Author(s): 
Simon Jupp

The Ontology Lookup Service (OLS) provides access to over 150 public biomedical ontologies. You can use OLS to search and visualise ontologies, and an API is also provided for...

In this webinar we introduce the Open Targets Consortium, its projects and focus on its Platform for drug target identification and selection. Denise Carvalho-Silva demonstrates how to browse the Open Targets Platform to visualise and interpret...

Author(s): 
Sanchayita Sen

This course will show you how to explore the structural information in a PDB entry using the Protein Data Bank in Europe (PDBe) - EMBL-EBI's resource for the collection, organisation and dissemination of data on biological macromolecular...

Author(s): 
Sameer Velankar

This quick tour provides a brief introduction to the Protein Data Bank in Europe (PDBe), EMBL-EBI's resource for the collection, organisation and dissemination of data on biological macromolecular structures.

Author(s): 
David Armstrong

The Protein Data Bank in Europe (PDBe) is a free and easily accessible resource for biological macromolecular structures. We collect, organise and disseminate data in both the Protein...

Author(s): 
Sanchayita Sen

This course will show you how to search the Protein Data Bank in Europe (PDBe) - EMBL-EBI's resource for the collection, organisation and dissemination of data on biological macromolecular structures. The course contains the following mini-...

Author(s): 
Gary Battle

PDBeChem allows you to search for chemical components (ligands, small molecules and monomers) that appear in PDB entries, and discover which protein structures bind a particular ligand. This course will show you how to use PDBeChem and what you...

Author(s): 
Gary Battle

PDBeFold can be used to identify structural homologues in the PDB. PDBe's Secondary Structure Matching service (SSM) allows you to interactively compare, align and superimpose protein structures in 3D. This course will show you how to use...

Author(s): 
Gary Battle

PDBePISA allows you to explore macromolecular (protein, DNA/RNA and ligand) interfaces and predict the quaternary structure of your protein. This course will show you how to use PDBePISA and what you can do with it.

An undergraduate...

This quick tour provides a brief introduction to the protein families database Pfam, based at EMBL-EBI. Each protein family is represented by multiple sequence alignments and a profile hidden Markov model, which is used to create a probabilistic...

The PhenoMeNal Gateway is the portal to your own PhenoMeNal Cloud Research Environment (CRE) containing an array of essential metabolomics applications, all available through a user-friendly Galaxy workflow environment. This course will give you...

Getting started with PhenoMeNal

PhenoMeNal is an easy-to-deploy e-infrastructure for scientific data processing and analysis, particularly well-suited for metabolomics applications. In this webinar you'll learn how to use the PhenoMeNal portal to...

Author(s): 
Laura Emery

This course provides a basic introduction to the field of phylogenetics, with an emphasis on how to read and interpret phylogenetic trees.

An undergraduate-level understanding of biology would be an advantage.

Juan Antonio Vizcaino presents this webinar on PRIDE and ProteomeXchange. PRIDE is a resource that stores mass spectrometry-based protein expression data (including e.g. mass...

This quick tour provides a brief introduction to the EMBL-EBI's PRoteomics IDEntifications database, PRIDE.

Author(s): 
Amaia Sangrador

This course will provide an introduction to protein classification and basic concepts, such as proteins families, domains and sequence features.

This course will provide an introduction to molecular interactions, their importance and the methodologies use to generate and capture interaction data.

Author(s): 
Nidhi Tyagi

Annotation of proteins based on structure-based analyses is an integral component of the UniProt Knowledgebase (UniProtKB). UniProt works closely with the Protein Databank in Europe (PDBe) to map 3D structural entries (~100,000) to the...

This course covers how to submit MS/MS data to ProteomeXchange via PRIDE. This course is aimed at people in the proteomics community (staff scientiststs, students, researchers, PIs, bioinformaticians) with data that they want to make available...

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