Author(s): 
Gary Battle

PDBeFold can be used to identify structural homologues in the PDB. PDBe's Secondary Structure Matching service (SSM) allows you to interactively compare, align and superimpose protein structures in 3D. This course will show you how to use...

Author(s): 
Gary Battle

PDBePISA allows you to explore macromolecular (protein, DNA/RNA and ligand) interfaces and predict the quaternary structure of your protein. This course will show you how to use PDBePISA and what you can do with it.

An undergraduate...

This quick tour provides a brief introduction to the protein families database Pfam, based at EMBL-EBI. Each protein family is represented by multiple sequence alignments and a profile hidden Markov model, which is used to create a probabilistic...

The PhenoMeNal Gateway is the portal to your own PhenoMeNal Cloud Research Environment (CRE) containing an array of essential metabolomics applications, all available through a user-friendly Galaxy workflow environment. This course will give you...

Getting started with PhenoMeNal

PhenoMeNal is an easy-to-deploy e-infrastructure for scientific data processing and analysis, particularly well-suited for metabolomics applications. In this webinar you'll learn how to use the PhenoMeNal portal to...

Author(s): 
Laura Emery

This course provides a basic introduction to the field of phylogenetics, with an emphasis on how to read and interpret phylogenetic trees.

An undergraduate-level understanding of biology would be an advantage.

Juan Antonio Vizcaino presents this webinar on PRIDE and ProteomeXchange. PRIDE is a resource that stores mass spectrometry-based protein expression data (including e.g. mass...

This quick tour provides a brief introduction to the EMBL-EBI's PRoteomics IDEntifications database, PRIDE.

Author(s): 
Amaia Sangrador

This course will provide an introduction to protein classification and basic concepts, such as proteins families, domains and sequence features.

This course will provide an introduction to molecular interactions, their importance and the methodologies use to generate and capture interaction data.

Author(s): 
Nidhi Tyagi

Annotation of proteins based on structure-based analyses is an integral component of the UniProt Knowledgebase (UniProtKB). UniProt works closely with the Protein Databank in Europe (PDBe) to map 3D structural entries (~100,000) to the...

This course covers how to submit MS/MS data to ProteomeXchange via PRIDE. This course is aimed at people in the proteomics community (staff scientiststs, students, researchers, PIs, bioinformaticians) with data that they want to make available...

Author(s): 
Sandra Orchard

This course will provide an overview of proteomics. We will then introduce resources provided by the EBI related to proteomics.

Author(s): 
George Georghiou

The Gene Ontology Annotation (GOA) project provides high-quality functional annotations to gene products, such as proteins, protein complexes and non-coding RNAs. Currently our database contains over 390 million annotations to 60 million...

Author(s): 
Steve Jupe

This course provides an overview to the Reactome pathway database web interface and the database content. For a short introduction to Reactome, please visit the...

Author(s): 
Steve Jupe

This two-part webinar from Steve Jupe provides you with an introduction to Reactome and how you can use it to explore biological pathways (recorded on 22 June 2016).

...

Author(s): 
Steve Jupe

This quick tour provides a brief introduction to Reactome, the biological pathway database.

Author(s): 
Steve Jupe

This course introduces the tools available via the Reactome pathway database web interface. For a short introduction to Reactome, please visit the Reactome...

Author(s): 
Sarah Burge

This quick tour provides a brief introduction to Rfam, the EBI's database of RNA families.

Author(s): 
Anton Petrov

RNAcentral is a database of non-coding RNA (ncRNA) sequences that aggregates data from multiple specialised resources and provides a single entry point for...

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