Analysis of metabolomics data (pathway mapping, chemical and pathway enrichment analysis)
Trainer: Michael Zimmermann, Maria Zimmermann
Overview: This session will focus on annotated features and normalised features of the metabolomics data analysis pipeline.
Learning outcomes:
- Perform metabolomics downstream analysis (molecular networking, pathway enrichment analysis).
Materials:
- Lecture
- Hands-on training session
- Links to practical:https://oc.embl.de/index.php/s/EBgV7HnA5efpph3
- https://www.metaboanalyst.ca/
Recommended reading:
1) Alseekh, S., Aharoni, A., Brotman, Y. et al. Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nat Methods 18, 747–756 (2021). https://doi.org/10.1038/s41592-021-01197-1