{"id":1697,"date":"2023-11-10T14:20:51","date_gmt":"2023-11-10T14:20:51","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials-temp-2023v2\/day-3\/pdbe-and-molstar\/"},"modified":"2026-01-12T13:42:42","modified_gmt":"2026-01-12T13:42:42","slug":"pdbe-and-molstar","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/macromolecular-structure-databases-tools-and-visualisation\/pdbe-and-molstar\/","title":{"rendered":"PDBe and Molstar"},"content":{"rendered":"\n<p><strong>Trainers:&nbsp;<\/strong><a rel=\"noreferrer noopener\" href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/trainer-biographies\/\" target=\"_blank\">David Armstrong, Sudakshina Ganguly &amp; Genevieve Evans<\/a><\/p>\n\n\n\n<p><strong>Overview:&nbsp;<\/strong>This lecture provides a comprehensive rundown of the PDBe and how to search for, examine, and visualise entries.<\/p>\n\n\n\n<p><strong>Learning outcomes:<\/strong><\/p>\n\n\n\n<p>By the end of this session you will be able to:<\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Search for PDB entries in PDBe and find different types of information about a macromolecule model.<\/li>\n<\/ul>\n\n\n\n<p><strong>Materials:<\/strong><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Recorded lecture<\/li>\n<\/ul>\n\n\n\n<iframe loading=\"lazy\" src=\"https:\/\/embl-ebi.cloud.panopto.eu\/Panopto\/Pages\/Embed.aspx?id=3328a442-d8be-4465-bb37-af32011584ba&amp;autoplay=false&amp;offerviewer=true&amp;showtitle=true&amp;showbrand=true&amp;captions=false&amp;interactivity=all\" height=\"405\" width=\"720\" style=\"border: 1px solid #464646;\" allowfullscreen=\"\" allow=\"autoplay\" aria-label=\"Panopto Embedded Video Player\"><\/iframe>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2023\/Structural_bioinformatics_2023\/Day_2\/PDBe%20and%20Mol_\/PDBe%20and%20visualisation%20talk.pptx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to presentation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Structural_bioinformatics_2025\/Day_2\/20251028_Structural_Bioinformatics_Intro_PDBe_Molstar.pptx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to presentation PDF<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2023\/Structural_bioinformatics_2023\/Day_2\/PDBe%20and%20Mol_\/pdbe_search_tutorial.docx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to PDBe tutorial<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Structural_bioinformatics_2025\/Day_2\/Animation-made-easy_molstar_Oct2025.pdf\">Animation in Molstar<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Structural_bioinformatics_2025\/Day_2\/20251028_Structural_Bioinformatics_Molstar_Orientation.pptx\">Molstar orientation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Structural_bioinformatics_2025\/Day_2\/Molstar-cheat-sheet_Oct2025.pdf\">Molstar cheatsheet (quick instructions)<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Trainers:&nbsp;David Armstrong, Sudakshina Ganguly &amp; Genevieve Evans Overview:&nbsp;This lecture provides a comprehensive rundown of the PDBe and how to search for, examine, and visualise entries. Learning outcomes: By the end of this session you will be able to: Materials:<\/p>\n","protected":false},"author":32,"featured_media":0,"parent":14,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-1697","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/1697","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/users\/32"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/comments?post=1697"}],"version-history":[{"count":5,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/1697\/revisions"}],"predecessor-version":[{"id":1885,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/1697\/revisions\/1885"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/14"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/media?parent=1697"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}