{"id":1320,"date":"2022-02-02T14:10:51","date_gmt":"2022-02-02T14:10:41","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/day-3\/emdb-and-empiar\/"},"modified":"2026-01-12T13:47:27","modified_gmt":"2026-01-12T13:47:27","slug":"emdb","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/macromolecular-structure-databases-tools-and-visualisation\/emdb\/","title":{"rendered":"EMDB"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\"><strong>Trainers: <\/strong><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/trainer-biographies\/\" target=\"_blank\" rel=\"noreferrer noopener\">Miao Ma, Minoosadat Tayebinia<\/a>, Zhe Wang, <a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/trainer-biographies\/\" target=\"_blank\" rel=\"noreferrer noopener\">Jack Turner<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Overview: <\/strong>In this lecture and practical a comprehensive rundown of the electron microscopy database EMDB is covered. <\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Materials: <\/strong><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Structural_bioinformatics_2025\/Day_2\/Practical%20EMDB.pdf\">2025 presentation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Structural_bioinformatics_2025\/Day_2\/Practical%20EMDB.pdf\">2025 tutorial<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2023\/Structural_bioinformatics_2023\/Day_2\/EMDB\/EMDBPresentation.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">Link to EM presentation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2022\/Structural_Bioinformatics_2022\/Day%205\/EMDB_Jack_Turner\/IntroToEMP1.pptx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to EMDB and visualisation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2022\/Structural_Bioinformatics_2022\/Day%205\/EMDB_Jack_Turner\/Validation_P3.pptx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to validation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2022\/Structural_Bioinformatics_2022\/Day%205\/EMDB_Jack_Turner\/EMDBwebsiteworksheetQonly-2.docx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to EMDB tutorial sheet<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2022\/Structural_Bioinformatics_2022\/Day%205\/EMDB_Jack_Turner\/EMDB%20website%20worksheet%20Questions_Answers.docx\" target=\"_blank\" rel=\"noreferrer noopener\">Link to EMDB tutorial answers<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2023\/Structural_bioinformatics_2023\/Day_2\/EMDB\/EMDB%20Data.zip\" target=\"_blank\" rel=\"noreferrer noopener\">Link to EM data<\/a> <\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Recorded lecture: <\/li>\n<\/ul>\n\n\n\n<iframe loading=\"lazy\" src=\"https:\/\/embl-ebi.cloud.panopto.eu\/Panopto\/Pages\/Embed.aspx?id=30f386c7-6c76-4905-8817-af3500e0aa6e&amp;autoplay=false&amp;offerviewer=true&amp;showtitle=true&amp;showbrand=true&amp;captions=false&amp;interactivity=all\" height=\"405\" width=\"720\" style=\"border: 1px solid #464646;\" allowfullscreen=\"\" allow=\"autoplay\" aria-label=\"Panopto Embedded Video Player\"><\/iframe>\n","protected":false},"excerpt":{"rendered":"<p>Trainers: Miao Ma, Minoosadat Tayebinia, Zhe Wang, Jack Turner Overview: In this lecture and practical a comprehensive rundown of the electron microscopy database EMDB is covered. Materials:<\/p>\n","protected":false},"author":18,"featured_media":0,"parent":14,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-1320","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/1320","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/users\/18"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/comments?post=1320"}],"version-history":[{"count":8,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/1320\/revisions"}],"predecessor-version":[{"id":1893,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/1320\/revisions\/1893"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/pages\/14"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/structural-bioinformatics-materials\/wp-json\/wp\/v2\/media?parent=1320"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}