Sequence classification: Pfam and InterPro
Trainers: Typhaine Paysan-Lafosse & Sara Chuguransky
Overview: In this lecture and practical the structural family resources HMMER, InterPro and Pfam are covered, which together hold protein families, domains, functional sites and predicted sites.
Learning objectives:
- Recognise Pfam website features and functionalites
- Perform different types of search on the Pfam website
- Interpret information output from Pfam website searches
- Explain different protein models algorithm
- Perform a protein sequence analysis
- Use InterPro efficiently
Materials: