{"id":22,"date":"2021-04-14T14:01:46","date_gmt":"2021-04-14T14:01:46","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/template\/further-learning\/"},"modified":"2023-01-10T16:23:22","modified_gmt":"2023-01-10T16:23:22","slug":"processing-data","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/processing-data\/","title":{"rendered":"Processing data"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\" id=\"block-745a9741-9262-4782-924f-bfa45aa5f0ac\">This section will repeat the course of analysis of scRNA-seq data from raw reads to cluster maps and show how to explore and interpret data using R as well as the Human Cell &amp; Single Cell Expression Atlases.<\/p>\n\n\n\n<ul class=\"wp-block-list\" id=\"block-3a8dd2a9-711e-463f-869e-fc2dc69ddc9a\"><li><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/processing-data\/getting-set-up-infrastructure-terms\/\">Getting set up: infrastructure terms<\/a><\/li><li><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/processing-data\/raw-reads-to-expression-matrix\/\">Raw reads to expression matrix<\/a><\/li><li><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/processing-data\/cell-atlases-interpretation\/\">Cell atlases &amp; Interpretation<\/a><\/li><\/ul>\n\n\n\n<p class=\"wp-block-paragraph\">Proceed through this section to view materials on all these topics or select a specific session from the above list to jump ahead.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>This section will repeat the course of analysis of scRNA-seq data from raw reads to cluster maps and show how to explore and interpret data using R as well as the Human Cell &amp; Single Cell Expression Atlases. Getting set up: infrastructure terms Raw reads to expression matrix Cell atlases &amp; Interpretation Proceed through this&#8230;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-22","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages\/22","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/comments?post=22"}],"version-history":[{"count":12,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages\/22\/revisions"}],"predecessor-version":[{"id":811,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages\/22\/revisions\/811"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/media?parent=22"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}