{"id":17,"date":"2021-04-14T14:01:46","date_gmt":"2021-04-14T14:01:45","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/template\/pre-course-challenges\/"},"modified":"2023-01-10T16:24:46","modified_gmt":"2023-01-10T16:24:46","slug":"analysing-data","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/analysing-data\/","title":{"rendered":"Analysing data"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\" id=\"block-745a9741-9262-4782-924f-bfa45aa5f0ac\">This section will cover the general workflow of the scRNA-seq analysis using Seurat from analysis design to final visualisation.<\/p>\n\n\n\n<ul class=\"wp-block-list\" id=\"block-3a8dd2a9-711e-463f-869e-fc2dc69ddc9a\"><li><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/analysing-data\/designing-your-analysis\/\">Designing your analysis<\/a><\/li><li><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/analysing-data\/pre-processing-and-dimensionality-reduction\/\">Pre-precessing and dimensionality reduction<\/a><\/li><li><a href=\"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/analysing-data\/from-umap-to-annotation\/\">From UMAP to annotation<\/a><\/li><\/ul>\n\n\n\n<p class=\"wp-block-paragraph\">Proceed through this section to view materials on all these topics or select a specific session from the above list to jump ahead.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>This section will cover the general workflow of the scRNA-seq analysis using Seurat from analysis design to final visualisation. Designing your analysis Pre-precessing and dimensionality reduction From UMAP to annotation Proceed through this section to view materials on all these topics or select a specific session from the above list to jump ahead.<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-17","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages\/17","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/comments?post=17"}],"version-history":[{"count":12,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages\/17\/revisions"}],"predecessor-version":[{"id":819,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/pages\/17\/revisions\/819"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r\/wp-json\/wp\/v2\/media?parent=17"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}