{"id":385,"date":"2022-08-11T08:56:45","date_gmt":"2022-08-11T08:56:08","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r-handbook-2022\/programme\/day-3\/from-umap-to-annotation\/"},"modified":"2026-02-10T15:50:42","modified_gmt":"2026-02-10T15:50:42","slug":"batch-correction-and-data-integration","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/analysing-data\/batch-correction-and-data-integration\/","title":{"rendered":"Batch correction and data integration"},"content":{"rendered":"\n<p><strong>Trainer:<\/strong>\u00a0Jiawei Wang, Jinzheng Ren, Yuyao Song<\/p>\n\n\n\n<p><strong>Overview:<\/strong>&nbsp;In this session, you will learn about the principal of batch correction and data integration, what are the differences between them, how to perform them using popular algorithms, as well as getting some practical advise.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>Materials<\/strong><\/h2>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a rel=\"noreferrer noopener\" href=\"https:\/\/drive.google.com\/file\/d\/1rsPX7TWZ_VvVWhZPl_Lw7ioSs8PUhD5O\/view?usp=drive_link\" target=\"_blank\">Recorded lecture<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Single_cell_rna_seq_analysis_using_python_2025\/Presentations\/scRNA-seq_py_course_integration_ysong_Feb2025.pptx\">Presentation slides<\/a><\/li>\n<\/ul>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>Practical<\/strong><\/h2>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/github.com\/Functional-Genomics\/scRNA-seq_python_course_2024\">GitHub repository<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Trainer:\u00a0Jiawei Wang, Jinzheng Ren, Yuyao Song Overview:&nbsp;In this session, you will learn about the principal of batch correction and data integration, what are the differences between them, how to perform them using popular algorithms, as well as getting some practical advise. Materials Practical<\/p>\n","protected":false},"author":6,"featured_media":0,"parent":1953,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-385","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/385","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/comments?post=385"}],"version-history":[{"count":24,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/385\/revisions"}],"predecessor-version":[{"id":2371,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/385\/revisions\/2371"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/1953"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/media?parent=385"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}