{"id":2211,"date":"2024-10-04T10:00:21","date_gmt":"2024-10-04T10:00:21","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/analysing-data\/single-cell-spatial-transcriptomics\/"},"modified":"2026-02-10T15:51:06","modified_gmt":"2026-02-10T15:51:06","slug":"single-cell-spatial-transcriptomics","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/analysing-data\/single-cell-spatial-transcriptomics\/","title":{"rendered":"Spatial transcriptomics"},"content":{"rendered":"\n<p><strong>Trainer:<\/strong> Helder Nakaya, Nadav Yayon<\/p>\n\n\n\n<p><strong>Overview:<\/strong><\/p>\n\n\n\n<p>This session will cover the theoretical foundations and explore spatial transcriptomics data analysis showing different research use cases.<\/p>\n\n\n\n<p><strong>Materials:<\/strong><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2025\/Single_cell_rna_seq_analysis_using_python_2025\/Presentations\/Spatial%20transcriptomics.pptx\">Presentation slides<\/a><\/li>\n<\/ul>\n\n\n\n<p><strong>Practical materials:<\/strong><\/p>\n\n\n\n<p><a href=\"https:\/\/github.com\/Functional-Genomics\/scRNA-seq_python_course_2024\/tree\/main\">GitHub repository<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Trainer: Helder Nakaya, Nadav Yayon Overview: This session will cover the theoretical foundations and explore spatial transcriptomics data analysis showing different research use cases. Materials: Practical materials: GitHub repository<\/p>\n","protected":false},"author":28,"featured_media":0,"parent":1953,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-2211","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/2211","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/users\/28"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/comments?post=2211"}],"version-history":[{"count":4,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/2211\/revisions"}],"predecessor-version":[{"id":2373,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/2211\/revisions\/2373"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/pages\/1953"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-materials\/wp-json\/wp\/v2\/media?parent=2211"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}