Technical help sheet
Technical requirements for data analysis
You will require the following tools for executing the practicals in this course:
| GitHub repository | https://github.com/Functional-Genomics/scRNA-seq_python_course_2024/tree/main |
| Web Browser (preferably Firefox) | https://www.mozilla.org/en-GB/firefox/new/ |
| Git version control system | https://git-scm.com/ |
| Jupyter Notebook | please see environment files in https://github.com/Functional-Genomics/scRNA-seq_python_course_2024/tree/main/Demonstrations |
| Python and specific Python packages, in separate conda envs | please see environment files in https://github.com/Functional-Genomics/scRNA-seq_python_course_2024/tree/main/Demonstrations |
| R, Python and specific packages in one conda environment | Please see environment files here: https://github.com/Functional-Genomics/scRNA-seq_python_course_2024/tree/main/Demonstrations |
In addition, we provide the Singularity container containing all tools and dependencies used for this course. It is a large single file around 10 GB in size.