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Single cell RNA-seq analysis using Python
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Single cell RNA-seq analysis using Python
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Overview
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Course Content
Planing your experiment
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Wet-lab overview
Dry-lab overview
Experimental design
Processing data
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Raw reads to expression matrix
QC, pre-processing and normalisation
Single cell Expression Atlas and single cell data submission
Analysing data
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Designing your analysis
Dimensionality reduction, clustering, and annotation
Batch correction and data integration
Spatial transcriptomics
Abundance and differential expression
Technical help sheet
Trainer biographies
Further learning
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