{"id":377,"date":"2022-08-11T07:26:45","date_gmt":"2022-08-11T07:26:42","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r-handbook-2022\/programme\/day-3\/pre-processing-and-dimensionality-reduction\/"},"modified":"2025-02-19T14:12:46","modified_gmt":"2025-02-19T14:12:46","slug":"dimensionality-reduction-clustering-and-annotation","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/programme-2\/day-3\/dimensionality-reduction-clustering-and-annotation\/","title":{"rendered":"Clustering and Cluster Marker Genes \u2014 Practicals"},"content":{"rendered":"\n<p><strong>Wednesday 19 February 2025<\/strong><\/p>\n\n\n\n<p><strong>Trainer:<\/strong> Anna Kothrakokoili Pournara<\/p>\n\n\n\n<p><strong>Overview:<\/strong> In this session, you will work through clustering and cluster marker genes.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>Practical materials<\/strong><\/h2>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/drive.google.com\/drive\/folders\/1kO6Jrq7_QdFsjFKYlUpS3Dt04FXoAF8O?usp=drive_link\">Practicals folder<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/github.com\/Functional-Genomics\/scRNA-seq_python_course_2024\" data-type=\"link\" data-id=\"https:\/\/github.com\/Functional-Genomics\/scRNA-seq_python_course_2024\">GitHub repository<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/embl-ebi.cloud.panopto.eu\/Panopto\/Pages\/Viewer.aspx?id=37ed6c29-cc8a-4a61-9fb5-b28900d2dab0\" target=\"_blank\" rel=\"noreferrer noopener\">Recorded session<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Wednesday 19 February 2025 Trainer: Anna Kothrakokoili Pournara Overview: In this session, you will work through clustering and cluster marker genes. Practical materials<\/p>\n","protected":false},"author":6,"featured_media":0,"parent":14,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-377","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/377","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/comments?post=377"}],"version-history":[{"count":31,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/377\/revisions"}],"predecessor-version":[{"id":3379,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/377\/revisions\/3379"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/14"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/media?parent=377"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}