{"id":277,"date":"2022-08-04T15:22:47","date_gmt":"2022-08-04T15:22:47","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-r-handbook-2022\/programme\/day-1\/pipeline-overview\/"},"modified":"2025-02-17T16:55:08","modified_gmt":"2025-02-17T16:55:08","slug":"pipeline-overview","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/programme-2\/day-1\/pipeline-overview\/","title":{"rendered":"Dry-lab overview"},"content":{"rendered":"\n<p><strong>Monday 17 February 2025<\/strong><\/p>\n\n\n\n<p><strong>Trainer:<\/strong> Wendi Bacon<\/p>\n\n\n\n<p id=\"block-4b8a7371-48dc-40ae-ac2a-1c59f562f909\"><strong>Overview:<\/strong>&nbsp;<\/p>\n\n\n\n<p>In this session, you will identify and describe challenges and limitations in scRNA seq analysis.<\/p>\n\n\n\n<p><br>Why does it matter?<\/p>\n\n\n\n<p><br>scRNA seq is a fantastic tool for answering scientific questions, but it is not the be-all\/end-all \u2013 careful and critical interpretation is required.<\/p>\n\n\n\n<p><strong>Materials<\/strong><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/docs.google.com\/document\/d\/1qpH7n6bcROv2Iy2-vXWopFp2pIKrluNGYaE0K1Rb83c\/edit?usp=sharing\" target=\"_blank\" rel=\"noreferrer noopener\">Breakout Room Instructions Link<\/a><\/li>\n\n\n\n<li>Presentation slides<\/li>\n\n\n\n<li><a href=\"https:\/\/embl-ebi.cloud.panopto.eu\/Panopto\/Pages\/Viewer.aspx?id=58afe3cf-77ca-4e31-88c0-b28701147234\" target=\"_blank\" rel=\"noreferrer noopener\">Recorded session<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Monday 17 February 2025 Trainer: Wendi Bacon Overview:&nbsp; In this session, you will identify and describe challenges and limitations in scRNA seq analysis. Why does it matter? scRNA seq is a fantastic tool for answering scientific questions, but it is not the be-all\/end-all \u2013 careful and critical interpretation is required. Materials<\/p>\n","protected":false},"author":6,"featured_media":0,"parent":12,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-277","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/277","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/comments?post=277"}],"version-history":[{"count":30,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/277\/revisions"}],"predecessor-version":[{"id":3299,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/277\/revisions\/3299"}],"up":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/pages\/12"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/single-cell-rna-seq-analysis-using-python-handbook-2025\/wp-json\/wp\/v2\/media?parent=277"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}