From differentially expressed genes at bulk level to the Single Cell Expression Atlas resource

Trainer: Pedro Madrigal and Silvie Fexova

Overview: This section describes single cell RNA sequencing technologies and introduces the Single Cell Expression Atlas. It explains how to explore gene expression data in this resource.

Learning outcomes:

By the end of this section, you will be able to:

• Explain the single-cell RNA sequencing process
• Describe plant specific challenges in single-cell transcriptomics
• Explore single cell experiments in Single Cell Expression Atlas

Materials:

Single Cell Gene Expression Atlas – slides

Exercises – Single Cell Expression Atlas: explore gene expression on the level of single cells