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Microscopy image analysis materials 2021

  • Overview
  • Search
  • Course content
  • Introduction to image analysis
    • Introduction to image analysis
    • ZeroCostDL4Mic: Exploring Deep-Learning in microscopy
    • Segmentation with StarDist and SplineDist
    • Practical session on machine learning
  • Introduction to bioimage databases and resources
    • The BioStudies database
    • The BioImage Archive
    • EMPIAR
    • IDR – Image Data Resource
  • Image analysis tools
    • Bioimage Model Zoo
    • Cell profiler
  • Trainer biographies
  • Technical help sheet
  • Further learning
  • Your feedback

Creative Commons

All materials are free cultural works licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license, except where further licensing details are provided.

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Introduction to bioimage databases and resources

This section will introduce you to the databases and resources useful for accessing and submitting bioimage data.

  • The BioStudies database
  • The BioImage Archive
  • EMPIAR
  • IDR – Image Data Resource

  • page navigation-left-circle-1_1 Practical session on machine learning
  • pageThe BioStudies database navigation-right-circle-1_1