Constraint-based modelling

Trainer: Andreas Dräger, Nantia Leonidou

Overview:  This section introduces constraint-based modelling and how to work with genome-scale metabolic models with COBRApy.

These materials are from the 2022 edition of the Mathematics of life: modelling molecular mechanisms course.

Learning outcomes:

By the end of this section you will be able to:

• Define constraint-based modelling
• Simulate a metabolic model with COBRApy

Materials:

• Simulate metabolism with computer model – slides

• Constraint-based modelling tutorial

• Constraint-based modelling tutorial – guidelines and additional information

• Data files for constraint-based modelling tutorial