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Course content
RNA-Seq introduction and fundamentals
- Experimental design
- Introduction to sequencing
RNA-Seq, QC and downstream analysis
RNA-Seq data best practices and data bases
Pipiline implementation workshop
Technical helpsheet
Trainer biographies
Further learning
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Toward single-cell sequencing

Trainer: Silvie Fexova and Liora Vilmovsky

Overview: This section introduces single-cell sequencing, including protocols and experimental design. This session was part of the 2024 iteration of the course.

Materials:

Lecture presentation

Learning objectives

After this section you should be able to:

Describe single cell sequencing
Identify the protocols and experimental design available at the moment for single-cell analysis: From gene expression to clustering and cell type annotation
Practice on example projects

Introduction to RNA-seq and functional interpretation

Toward single-cell sequencing