{"id":14,"date":"2021-04-14T14:01:45","date_gmt":"2021-04-14T14:01:45","guid":{"rendered":"https:\/\/www.ebi.ac.uk\/training\/materials\/template\/day-3\/"},"modified":"2024-06-07T13:04:34","modified_gmt":"2024-06-07T13:04:34","slug":"pdbe-kb","status":"publish","type":"page","link":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/pdbe-kb\/","title":{"rendered":"PDBe-KB"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\"><strong>Trainers: <\/strong>Genevieve Evans and Sudakshina Ganguly<\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Overview:<\/strong> In this section, explore the use of <a href=\"https:\/\/www.ebi.ac.uk\/pdbe\/\" target=\"_blank\" rel=\"noreferrer noopener\">PDBe-KB<\/a> to discover further variant information.&nbsp;<\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Learning outcomes:<\/strong> <\/p>\n\n\n\n<p class=\"wp-block-paragraph\">After this section you should be able to:<\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Identify and evaluate experimental and predicted structures representing protein variants using PDBe-KB and AlphaFoldDB (AFDB)<\/li>\n\n\n\n<li>Interpret the functional implications of variant-induced changes in protein structure<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Materials:<\/strong><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2024\/Interpreting_the_effects_of_genetic_variants_on_protein_structure_and_function\/Variants_Workshop_PDBe-KB_presentation.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDBe-KB presentation slides<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2024\/Interpreting_the_effects_of_genetic_variants_on_protein_structure_and_function\/PDBe-KB_Instructions.pdf\" target=\"_blank\" rel=\"noreferrer noopener\">PDBe-KB instructions file<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/ftp.ebi.ac.uk\/pub\/training\/2024\/Interpreting_the_effects_of_genetic_variants_on_protein_structure_and_function\/Molstar_Guide_for_Buried_or_Surface_Question.pdf\">Molstar Guide<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Trainers: Genevieve Evans and Sudakshina Ganguly Overview: In this section, explore the use of PDBe-KB to discover further variant information.&nbsp; Learning outcomes: After this section you should be able to: Materials:<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-14","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/pages\/14","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/comments?post=14"}],"version-history":[{"count":12,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/pages\/14\/revisions"}],"predecessor-version":[{"id":743,"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/pages\/14\/revisions\/743"}],"wp:attachment":[{"href":"https:\/\/www.ebi.ac.uk\/training\/materials\/interpreting-effects-genetic-variants-protein-structure-function\/wp-json\/wp\/v2\/media?parent=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}