The event "CCPBioSim workshop: structural bioinformatics resources and tools for molecular dynamics simulations", provided hands-on training on protein and structural bioinformatics resources in the context of molecular dynamics, biomolecular modelling, and simulations. The workshop was sponsored by the Collaborative Computational Project for Biomolecular Simulation (CCPBioSim). Here, we have made the course materials available for you to access any time.

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Using these materials

Using these materials

These course materials provide a mixture of pre-recorded lectures, presentations and practicals to help advance your knowledge and skills in the analysis of biological data. You may select your topic of interest from the Course content page to view the relevant materials or work your way through all the course materials. 

To find out more about the trainers who created these materials, follow the links from the Course content page or go directly to the Trainer biographies page. You can also find the software requirements for the practicals in the Technical help sheet.

In the Further learning section you may explore the details about the EMBL-EBI’s free access online tutorials and webinars on a variety of life sciences topics.

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Learning outcomes

After the workshop you should be able to: 

• Browse and search EMBL-EBI nucleotide, protein, and structure databases
• Validate experimentally determined and predicted protein structures
• Predict the effects of variants on protein structure and function
• Apply training to small research questions in groups and present findings

Material collection editors

• Sarah Fegan, Science and Technology Facilities Council
• Franca Fraternali, University College London
• Piv Gopalasingam, EMBL-EBI
• Sarah Harris, University of Leeds
• Pirjo Johnson, University of Leeds
• Sameer Velankar, EMBL-EBI

DOI: 10.6019/TOL.CCPBioSimWorkshop-t.2023.00001.1