Zebrafish-specific dataset practicals

Trainer: Busch-Nentwich Group

Overview: These exercises use a real zebrafish RNA-seq dataset to practise using the command line and R for filtering and transforming data. This is followed by exercises covering how to produce some common visualisations of RNA-seq data.

Learning outcomes:

By the end of this session you will be able to:

• Filter and transform data using command line and R
• Produce common visualisations of RNA-seq data

Materials:

• Dataset description
• Practical files
• Platform: https://funcgen2022.buschlab.org/

Check the Help sheet page to find out the software requirements for this practical.