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Bioinformatics approaches to viruses

  • Overview
  • Search
  • Course Content
  • Approaches to virus sequencing — COVID et al.
  • Sequence retrieval and quality control
    • COVID-19 data portal
    • Sequence retrieval with ENA
    • Sequence quality control
  • Assembly and comparative analysis
    • Assembly and comparative analysis of viral genomes
    • Comparative analysis — Case studies
  • Phylogenomics and genome surveillance
    • Introduction to phylogenomics methods
    • Phylogenomics methods – discrete phylogeography
    • Nextstrain resource
    • Metaviromics
  • Public health and Policy
  • Technical help sheet
  • Trainer biographies
  • Further learning
  • Your feedback

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All materials are free cultural works licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) license, except where further licensing details are provided.

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Assembly and comparative analysis

This section will introduce tools for assembly and comparative analysis of viral genomes.

  • Assembly and comparative analysis of viral genomes
  • Comparative analyses — case studies

Proceed through this section to view materials on all these topics or select a specific session from the above list to jump ahead.

  • page navigation-left-circle-1_1 Sequence quality control
  • pageAssembly and comparative analysis of viral genomes navigation-right-circle-1_1