ENA Sequence Retrieval workshop

Date:

  Tuesday 13 March 2018

Venue: 

European Bioinformatics Institute (EMBL-EBI) - Wellcome Genome Campus, Hinxton, Cambridge,  CB10 1SD, United Kingdom

Application opens: 

Friday January 05 2018

Application deadline: 

Wednesday February 28 2018

Participation: 

First come, first served

Contact: 

Annalisa Milano

Registration fee: 

£0

Overview

This course will introduce users to the powerful search and retrieval methods available within ENA (European Nucleotide Archive) for annotated sequences, genomes, raw data and metadata, as well as download options from the ENA browser and an introduction to the various ENA browser tools.

There will also be a section on cross references and how to retrieve accessions for other resources linked to the primary data in ENA. There will be time at the end of the course for users to present their own use cases or request specific help for their own queries, enabling them to perform searches to enhance their own research.

Please visit http://www.marinetraining.eu/ena-sequence-retrieval-workshop for full details of this event.

Syllabus, tools and resources

The course will introduce users to:

  • Advanced search and the ENA portal API
  • Downloading sequence data from the DNA browser
  • Downloading run / analysis data
  • ENA browser tools
  • Exploring links betweem ENA data types and other resources

Participants will need to bring their own laptops.