Bringing Structure to Biology - Protein Structures and Tools - Cambridge, UK

Date:

  Monday 17 February 2014

Venue: 

University of Cambridge - Downing Site, Cambridge,  CB2 3AR, United Kingdom

Participation: 

First come, first served

Contact: 

Holly Foster

Registration fee: 

£0

Registration closed

Find other similar courses »

Course Overview

 

Programme

Time Topic Trainer
Part 1: INTRODUCTION AND BASIC SERVICES
9:30 - 10:15 Introduction - An overview of the PDBe and its role in the wwPDB. Brief introduction to the PDBe web pages. Quips and mini-tutorials - Worked examples of how to examine structures. Gary Battle
10:15 - 10:45 What can we learn from structures? - Examples from the PDB archive. Gary Battle
10:45- 11:30 Tea/Coffee - round-table discussion of common searches, user requirements  
11:30 - 12:30 Browsing and anatomy of a PDB Summary page - Talk and mini-tutorials. Gary Battle 
12:30 - 13:30 ~~~ Lunch ~~~  
Part 2: ADVANCED SERVICES
13:30 - 14:30 PDBePISA - Analysis of quaternary structures, interfaces and protein-protein interactions. Talk and mini-tutorial. Gary Battle
14:30 - 15:30 PDBeFold - Finding proteins with similar 3D structure - structural alignment and analysis tool. Talk and mini-tutorial. Gary Battle
15:30 - 15:45 ~~~ Tea/Coffee ~~~  
15:45 - 16:30 Chemistry in the PDB - Browsing compounds, fragment searches, binding sites analysis Gary Battle 
16:30 - 17:00 Open session Q&A - Concluding opportunity for questions and course feedback Gary Battle