The Bioinformatics Roadshow - Rostock, Germany

Date:

  Friday 24 September 2010

Application deadline: 

Tuesday 24 August 2010

Contact: 

Alison Barker

Registration closed

Overview

What will I learn?

  • To understand the structure and concepts of the Gene Ontology
  • To learn how to search for small molecules and understand their chemical ontology and associated bioactivity data
  • To understand and review the different experimental approaches and the importance of bioinformatics in MS
  • To understand what is to be found in a molecular interaction database, alternative data formats and the various tools designed to work with them
  • How to browse and retrieve data from the ArrayExpress public repository of functional genomics data.
  • How to browse and retrieve data from the Gene Expression Atlas
  • How to query for condition-specific gene expression patterns as well as broader exploratory searches for biologically interesting genes/samples correlations
  • Some of the examples used in the training will be tailored to stem cell data analysis

Additional information

Visit the Institute's website

Contact

For further information, to register interest, or enquire about hosting a roadshow - please contact the EMBL-EBI Events Team, T: +44 (0)1223 494444.



The Bioinformatics Roadshow is funded by the European Commission under SLING, grant agreement number 226073 (Integrating Activity) within Research Infrastructures of the FP7 Capacities Specific Programme.

Programme

 

Times Topic Trainer
Friday 24 September 2010
15:30 - 17:00 Ontologies + ChEBI Janna Hastings
17:00 -17:15 Tea break  
17:15 - 19:00 Ontologies + ChEBI Janna Hastings
19:00 - 20:00 PICR + OLS Phil Jones
Saturday 25 September 2010
10:00 - 12:00

Functional Genomics

Ibrahim Emam
12:00 - 13:00 Lunch  
13:00 - 14:30 Functional Genomics Ibrahim Emam
14:30 - 14:45 Tea break  
14:45 - 16:45 PRIDE Phil Jones
16:45 - 17:00 Tea break  
17:00 - 19:00 Reactome  Phil Jones

Download course materials